Protein Info for HGI48_RS07060 in Dickeya dianthicola 67-19

Annotation: ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 607 PF01935: DUF87" amino acids 155 to 432 (278 residues), 101.1 bits, see alignment E=1.5e-32 PF10412: TrwB_AAD_bind" amino acids 177 to 231 (55 residues), 20.8 bits, see alignment 2.5e-08

Best Hits

KEGG orthology group: K06915, (no description) (inferred from 87% identity to dps:DP1919)

Predicted SEED Role

"Bipolar DNA helicase HerA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A7L9RBT7 at UniProt or InterPro

Protein Sequence (607 amino acids)

>HGI48_RS07060 ATP-binding protein (Dickeya dianthicola 67-19)
MSSIFQSRKELKVGKIIEVAGNNLRIEIDESVNELIRAVDGQVYPVGQMGSIIKVHFGRK
LLFAFVRSLKMRSELITEDSNQLINAADDARILEADLFGQGVWSNKNSRLEFSRGVETYP
LPLQSAYICLNDELEAVYKAAESNAQDEAITPMVPIGNYIGGNNAVCRANIDKLFGHHFA
ILGSTGSGKSGTVASILHSVLDHRPRDTTLKPRIVMIDPHGEYASAFGNRAKVFRAYNDA
SAVEDEAELLKLPYWLMSSDELRSLIIGKTEHEATSQNNIVYEAITYSRLLEAGYVQDVG
AEPNGGLEAAFADGVIEDQVLNFDRDKPVPFKLTQFVKHIDKVQGRKEGKQEKLAASSGR
DKIESILKKLKVLRSNPQLSFLLKEYSEADSPKLKDILAQFVGEANGKDIRIIDISGLPN
EVAGPLTALISRLLFQYKLWQTREEREKDPILFICEEAHRYVPNHGEAQYKEAQDAIRRI
AKEGRKYGLGLGLISQRPSDVESTVLSQCNSWIVLRLSNSSDQEHVSRFLPDSLSGLTKM
LSALTRREAIFVGEAAALPSRIRIRELSPDKLPNSNDIKFASGWSNDATQEAGLIEVVNR
WCGTSGE