Protein Info for HGI48_RS07050 in Dickeya dianthicola 67-19

Annotation: IS110 family transposase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 414 PF01548: DEDD_Tnp_IS110" amino acids 16 to 170 (155 residues), 66.8 bits, see alignment E=2.1e-22 PF02371: Transposase_20" amino acids 280 to 365 (86 residues), 77.8 bits, see alignment E=6.5e-26

Best Hits

KEGG orthology group: None (inferred from 97% identity to ddc:Dd586_0722)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A7L9RBQ7 at UniProt or InterPro

Protein Sequence (414 amino acids)

>HGI48_RS07050 IS110 family transposase (Dickeya dianthicola 67-19)
MNTLVSNISLSGTLIALDIAKKHHDAKIRHPDGRTSYLRIENTLEGFNRLLALTASPHDD
IIAAFEPTADYHRNIAWWLHKQGVQCHLVSSVRCARAREMLFKTWDKNDRKDASVIMYLL
EQGLSSPFYDPLANGIIDIQEISNTYHQVTLARTRCLNSLVNHYLTLYFPEAEQFLHMSR
AEWFCQFLLQFPTPSCITSLNRDLFVKQSWDVVGRKQYKKQFLEHLYDVAADSIALPLSE
DSLAVTTFRLQLHRYVGLSAQRLQLEKQAENYLQERSDYRHLRTIPGIGAIIALMIIAES
GDLTRFAHYRQYLNFCGFNLSASQSGQKHSGYRLSKRGNARLRYAFWLAATVAVRTRENS
FRYKYERYIRENGDKPDQKRKAMTAVATKVARVAHAIVKQDIDYKGYYEISHGT