Protein Info for HGI48_RS03695 in Dickeya dianthicola 67-19

Annotation: glycoside hydrolase 43 family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF04616: Glyco_hydro_43
  • amino acids 19 to 288 (270 residues), 226.5 bits, E=4.7e-71
• PF17851: GH43_C2
  • amino acids 323 to 520 (198 residues), 105.5 bits, E=3.2e-34

Best Hits

KEGG orthology group: None (inferred from 94% identity to ddd:Dda3937_01181)

Predicted SEED Role

"Beta-xylosidase (EC 3.2.1.37)" in subsystem Xylose utilization (EC 3.2.1.37)

MetaCyc Pathways

• (1,4)-β-D-xylan degradation (2/2 steps found)

KEGG Metabolic Maps

• Nucleotide sugars metabolism
• Starch and sucrose metabolism

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.2.1.37

Sequence Analysis Tools

See A0A7L9RA23 at UniProt or InterPro

Protein Sequence (522 amino acids)

>HGI48_RS03695 glycoside hydrolase 43 family protein (Dickeya dianthicola 67-19)
MEPSLMTSPWNPDQGDGRYHNPILFADYSDPDIVRVGEDIYLVSSSFNHMPALPILHSRD
LVNWTLINHVFARFDLPGYERFQPGKGVWAPSIRYHAGKFWVFFSTPDEGIFLCQADDPR
GDWSAPHCVKSAKGWIDPCPFWDDDGSAWLIHAFAFSRSGRKHQLQLCRMSNDGRQLLDE
GRIIVDGTASQPTLEGPKLYKRNGWYYIFAPAGGVPTGWQTVLRAASLQGPWQARVALHQ
GRSAVNGPHQGGWVELENGESWFVHFQDRHAYGRVVHLQPMQWLDDWPQIGVQPGDGGPG
EPVMEAAMPAVSADKTCAQPATSDDFTADRLGLQWQWQANPDAGWYALRRPGLRLFCRPM
PQRHGAPSWYDVPNLLMQKFPAETFTVTTRLQAVLENVGDRGGLMVYGERFAFLGLEKTA
DGVALTSGYGWMTDAQELRQYAGPALPVGEEAHTLELRVTVLPNARCQFAWRTPDRGFTP
VGEPFAAGPGKWVGAKIGLYALSLPEQRGQSGVDVDFFHVTP