Protein Info for HER17_RS13300 in Pectobacterium carotovorum WPP14

Annotation: epoxyqueuosine reductase QueH

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 223 PF02677: QueH" amino acids 23 to 197 (175 residues), 221.6 bits, see alignment E=4e-70

Best Hits

Swiss-Prot: 78% identical to QUEH_ACIAD: Epoxyqueuosine reductase QueH (queH) from Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)

KEGG orthology group: K09765, hypothetical protein (inferred from 97% identity to pct:PC1_1532)

Predicted SEED Role

"FIG053235: Diacylglucosamine hydrolase like"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (223 amino acids)

>HER17_RS13300 epoxyqueuosine reductase QueH (Pectobacterium carotovorum WPP14)
MSTVKTGALQRPQLSLPNNADKLLLHSCCAPCSGEVMEAITASGIDYTIFFYNPNIHPQR
EYLIRKEENIRFAEQHNVPFIDADYDTDNWFERAKGMEWEPERGIRCTMCFDMRFERTAL
YAAENGFSVISSSLGISRWKNMQQITECGHNAAQKYPGVTYWDYNWRKGGGSSRMIEISK
RERFYQQEYCGCIYSLRDSNKHRKSQGRDIIRIGKLYYGDETE