Protein Info for HER17_RS04305 in Pectobacterium carotovorum WPP14

Annotation: amino acid ABC transporter ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00005: ABC_tran
  • amino acids 17 to 165 (149 residues), 127.5 bits, E=6e-41

Best Hits

Swiss-Prot: 62% identical to GLNQ_BACSU: Glutamine transport ATP-binding protein GlnQ (glnQ) from Bacillus subtilis (strain 168)

KEGG orthology group: None (inferred from 95% identity to pct:PC1_3357)

MetaCyc: 59% identical to cystine ABC transporter ATP binding subunit (Escherichia coli K-12 substr. MG1655)
TRANS-RXN-290 [EC: 7.4.2.12]; 7.4.2.12 [EC: 7.4.2.12]; 7.4.2.- [EC: 7.4.2.12]; 7.4.2.- [EC: 7.4.2.12]; 7.4.2.- [EC: 7.4.2.12]; 7.4.2.- [EC: 7.4.2.12]

Predicted SEED Role

"Glutamate transport ATP-binding protein"

Isozymes

No predicted isozymes

Use Curated BLAST to search for 7.4.2.12

Protein Sequence (240 amino acids)

>HER17_RS04305 amino acid ABC transporter ATP-binding protein (Pectobacterium carotovorum WPP14)
MIHVKNLQKQFGDTHVLRGISCDIAPQEVLCLIGPSGSGKSTFLRCINALETLSAGEITV
NGFAIHDQKTNINHVRESVGMVFQRFNLFPHMTVLENIIMAPMDVKKLSRAQAVERAKAL
LSKVGLLDKIDAWPNSLSGGQQQRVAIARALAMEPAIMLFDEPTSALDPELVGEVLAVMK
TLANEGMTMVIVTHEMAFAREVADRVIFIDQGIIQEEGTPEAIFTHPSNPRTQAFLSKIL