Protein Info for HEPCGN_22330 in Escherichia coli ECOR38

Name: inaA
Annotation: lipopolysaccharide kinase InaA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 216 PF06293: Kdo" amino acids 11 to 213 (203 residues), 251.3 bits, see alignment E=3e-79

Best Hits

Swiss-Prot: 98% identical to INAA_ECOLI: Protein InaA (inaA) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 98% identity to eco:b2237)

Predicted SEED Role

"Protein inaA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (216 amino acids)

>HEPCGN_22330 lipopolysaccharide kinase InaA (Escherichia coli ECOR38)
MAVSAKHDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYP
FGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYARH
AVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR
LRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM