Protein Info for HEPCGN_14625 in Escherichia coli ECOR38

Annotation: YadA-like family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1645 signal peptide" amino acids 34 to 34 (1 residues), see Phobius details amino acids 54 to 54 (1 residues), see Phobius details transmembrane" amino acids 35 to 53 (19 residues), see Phobius details PF13018: ESPR" amino acids 1 to 48 (48 residues), 56.7 bits, see alignment (E = 5e-19) PF05658: YadA_head" amino acids 117 to 142 (26 residues), 17.3 bits, see alignment (E = 9.6e-07) amino acids 150 to 172 (23 residues), 16.3 bits, see alignment (E = 2.1e-06) amino acids 174 to 198 (25 residues), 24.4 bits, see alignment (E = 5.6e-09) amino acids 202 to 228 (27 residues), 26.4 bits, see alignment (E = 1.3e-09) amino acids 232 to 256 (25 residues), 15.7 bits, see alignment (E = 3e-06) amino acids 258 to 284 (27 residues), 26.4 bits, see alignment (E = 1.4e-09) amino acids 1128 to 1154 (27 residues), 24.3 bits, see alignment (E = 6.1e-09) amino acids 1288 to 1314 (27 residues), 19.1 bits, see alignment (E = 2.8e-07) amino acids 1421 to 1438 (18 residues), 13.9 bits, see alignment (E = 1.1e-05) amino acids 1426 to 1452 (27 residues), 30.3 bits, see alignment (E = 8.3e-11) amino acids 1440 to 1465 (26 residues), 17.7 bits, see alignment (E = 7.1e-07) PF05662: YadA_stalk" amino acids 302 to 344 (43 residues), 35.3 bits, see alignment (E = 2.4e-12) amino acids 394 to 423 (30 residues), 38.8 bits, see alignment (E = 2e-13) amino acids 442 to 484 (43 residues), 44.1 bits, see alignment (E = 4.3e-15) amino acids 527 to 571 (45 residues), 40.5 bits, see alignment (E = 5.9e-14) amino acids 605 to 649 (45 residues), 40.5 bits, see alignment (E = 5.9e-14) amino acids 683 to 727 (45 residues), 40.5 bits, see alignment (E = 5.9e-14) amino acids 761 to 803 (43 residues), 32.9 bits, see alignment (E = 1.4e-11) amino acids 862 to 903 (42 residues), 22.9 bits, see alignment (E = 1.8e-08) amino acids 961 to 1003 (43 residues), 31.8 bits, see alignment (E = 3.1e-11) amino acids 1057 to 1099 (43 residues), 33.1 bits, see alignment (E = 1.2e-11) amino acids 1213 to 1252 (40 residues), 34.3 bits, see alignment (E = 5.2e-12) amino acids 1349 to 1390 (42 residues), 42.5 bits, see alignment (E = 1.4e-14) amino acids 1470 to 1494 (25 residues), 42.8 bits, see alignment (E = 1.1e-14) amino acids 1523 to 1555 (33 residues), 33 bits, see alignment (E = 1.3e-11) PF03895: YadA_anchor" amino acids 1585 to 1645 (61 residues), 70.8 bits, see alignment (E = 1.7e-23)

Best Hits

Predicted SEED Role

"FIG00638466: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1645 amino acids)

>HEPCGN_14625 YadA-like family protein (Escherichia coli ECOR38)
MNKIFKVIWNPATGSYSVASETAKSRGKKSGRSKLLISALVAGGLLSSFGALAQAGLDTG
TGVTPAGHNNGTGWIAIGTDAEASTHTTTNGAATAVGYYSKALGMWSTTLGAYSQSNGDA
SLALGVKAQSNGDRSISMGASSSASINAGYSIAMGVFAFTDAEYAVALGNESKALGKYSL
ALGNASQASGESSIAFGNTSEASEQNAIALGQGSIASKVNSIALGSNSSSAGENAIALGE
GSAAGGSNSLAFGSQSRASGNDSVALGVGATAATDNSVAIGAGSTTDASNTVSVGNSTTK
RKIVNMAAGAISNTSTDAINGSQLYTISDSVAKRLGGGATVGNDGSISAVSYALKSGTYN
NVGDALSGIDNNTLQWNRTAGAFTAAHGSNTTSKITNVAKGTVSATSTDVVNGSQLYDLQ
QDALLWNGTAFSAAHGTDVTSKITNVTAGELSDTSTDAVNGSQLKATKDDVAANTTNITN
LTGEVAGNTTSITNLTDTVNNLGEDALKWDDAAGAFTAAHGTNATNKITNVTAGDLTAGS
TDAVNGSQLKTTNDNVATNTTNIATNTTNITNLTNAVDSLGDDSLLWNKAAGAFSAAHGT
DATSKITNVTAGDLTAGSTDAVNGSQLKTTNDNVATNTTNIATNTTNITNLTNAVDSLGD
DSLLWNKAAGAFSAAHGTDATSKITNVTAGDLTAGSTDAVNGSQLKTTNDNVATNTTNIA
TNTTNITNLTDTVNNLGEDALKWDDAAGAFTAAHGTNATNKISNVQAGIVSSDSTDAING
SQLYGLADSFTSYLGGGADISDTGVLTGPTYSIGGTDYTNVGDALAAINTSFSDSLGDAL
LWDTTAGKFSAKHGINNDPSVITDVANGAVSSTSSDAINGSQLYGVSDYIADALGGNAVV
NADGSITTPTYAIAGGSYNNVGDALEAIDTTLDDALLWDATANDGAGAFSAGRGVDNTAS
KITNVANGAISATSSDAINGSQLYTTNKYIADALGGNAEVNADGTITAPTYTIANTDYNN
VGEALDALDENALLWDATANNGEGAYNASHDGKASIITNVADGNIGEGSTDAINGSQLFN
TNMLIQQNSEVINQLAGNTSETYIEENGAGINYVRTNDTGLTFTDASAQGVGATAVGYNS
VASKASSVAIGQDSRSEVETGIALGSSSVSSRLIVKGSRDTSVSEEGVVIGYDTTDGELL
GALSIGDDGKYRQIINVADGSEAHDAVTVRQLQNAIGAVATTPTKYYHANSTAEDSLAVG
EDSLAMGAKTIVNGNAGIGIGLNTLVLADAINGIAIGSNASANHANSIAMGNGSQTTRGA
QTNYTAYNMDAPQNSVGEFSVGSEDGQRQITNVAAGSADTDAVNVGQLKVTDAQVSQNTQ
SITNLNNQVTNLDTRVTNIENGIGDIVTTGSTKYFKTNTDGVDANAQGKDSVAIGSGSIA
AADNSVALGTGSVANEENTISVGSSTNQRRITNVAAGVNATDAVNVSQLKSSEAGGVRYD
TKADGSVDYSNITLGGGNGGTTRISNVSAGVNNNDAVNYAQLKQSVQETKQYTDQRMVEM
DNKLSKTESKLSGGIASAMAMTGLPQAYTPGASMASIGGGTYNGESAVALGVSMVSANGR
WVYKLQGSTNSQGEYSAALGAGIQW