Protein Info for HEPCGN_07325 in Escherichia coli ECOR38

Name: tauD
Annotation: taurine dioxygenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 342 transmembrane" amino acids 20 to 39 (20 residues), see Phobius details amino acids 52 to 75 (24 residues), see Phobius details PF00528: BPD_transp_1" amino acids 1 to 83 (83 residues), 38.5 bits, see alignment E=1.1e-13 PF02668: TauD" amino acids 82 to 331 (250 residues), 236.9 bits, see alignment E=3.9e-74

Best Hits

KEGG orthology group: K03119, taurine dioxygenase [EC: 1.14.11.17] (inferred from 99% identity to ect:ECIAI39_0313)

Predicted SEED Role

"Alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.11.17)" in subsystem Alkanesulfonate assimilation or Taurine Utilization (EC 1.14.11.17)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.14.11.17

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (342 amino acids)

>HEPCGN_07325 taurine dioxygenase (Escherichia coli ECOR38)
VLWFVILPGALPEILTGLRIGLGVGWSTLVAAELIAATRGLGFMVQSAGEFLATDVVLAG
IAVIAIIAFLLELGLRALQRRLTRPLSDNQFEQLYHAVLRHQVVFLRDQAITPQQQRALA
QRFGELHIHPVYPHAEGVDEIIVLDTHNDNPPDNDNWHTDVTFIETPPAGAILAAKELPS
TGGDTLWTSGIAAYEALSVPFRQLLSGLRAEHDFRKSFPEYKYRKTEEEHQRWREAVAKN
PPLLHPVVRTHPVSGKQALFVNEGFTTRIVDVSEKESEALLSFLFAHITKPEFQVRWRWQ
PNDIAIWDNRVTQHYANADYLPQRRIMHRATILGDKPFYRAG