Protein Info for GFF923 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Annotation: PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00367: PTS_EIIB
  • amino acids 12 to 40 (29 residues), 45.7 bits, 1.8e-16
• TIGR00826: PTS system, glucose-like IIB component
  • amino acids 30 to 111 (82 residues), 60.4 bits, E=8.5e-21

Predicted SEED Role

"PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69)" in subsystem Trehalose Uptake and Utilization (EC 2.7.1.69)

KEGG Metabolic Maps

• Aminosugars metabolism
• Ascorbate and aldarate metabolism
• Fructose and mannose metabolism
• Galactose metabolism
• Glycolysis / Gluconeogenesis
• Nucleotide sugars metabolism
• Starch and sucrose metabolism

Isozymes

Compare fitness of predicted isozymes for: 2.7.1.69

Use Curated BLAST to search for 2.7.1.69

Protein Sequence (193 amino acids)

>GFF923 PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69) (Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868)
MSKVKQADIDRLIDLVGGRDNIATVSHCITRLRFVLHQPANARPKEIEQLPMVKGCFTNA
GQFQVVIGTDVGDYYNALLETTGKAYADKEQAKKAARQNMKWHEQLISHFAEIFFPLLPA
LISGGLILGFRNVIGDVPMSNGQTLAQMHPALKTLYDFLWLIGEAIFFYLPVGICWSAVK
KWAARRFLVSCSA