Protein Info for GFF818 in Hydrogenophaga sp. GW460-11-11-14-LB1

Annotation: Phosphopantetheine adenylyltransferase (EC 2.7.7.3)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 172 TIGR01510: pantetheine-phosphate adenylyltransferase" amino acids 14 to 166 (153 residues), 177.5 bits, see alignment E=1.9e-56 TIGR00125: cytidyltransferase-like domain" amino acids 14 to 67 (54 residues), 48.5 bits, see alignment E=7.7e-17 PF01467: CTP_transf_like" amino acids 16 to 145 (130 residues), 78.4 bits, see alignment E=3e-26

Best Hits

Swiss-Prot: 62% identical to COAD_ACIET: Phosphopantetheine adenylyltransferase (coaD) from Acidovorax ebreus (strain TPSY)

KEGG orthology group: K00954, pantetheine-phosphate adenylyltransferase [EC: 2.7.7.3] (inferred from 74% identity to pol:Bpro_1282)

MetaCyc: 45% identical to pantetheine-phosphate adenylyltransferase (Escherichia coli K-12 substr. MG1655)
Pantetheine-phosphate adenylyltransferase. [EC: 2.7.7.3]

Predicted SEED Role

"Phosphopantetheine adenylyltransferase (EC 2.7.7.3)" in subsystem Coenzyme A Biosynthesis (EC 2.7.7.3)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.7.3

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (172 amino acids)

>GFF818 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) (Hydrogenophaga sp. GW460-11-11-14-LB1)
MSSALASTGGSGRVAVYSGTFDPITLGHEDVARRAALLFDDVIIAVAIAHHKKTRFTLQE
RLDMAAEVASRMPGRVRVLPFEGLIMDFCRQHGATAVVRGIRNLTDFDYEAQMAAMNRKL
HAAVETVFLLPQAELQCISSTLVREISQLGGDVSQMVSGAVAARLAPKPLQA