Protein Info for GFF694 in Methylophilus sp. DMC18

Annotation: D-inositol-3-phosphate glycosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 380 PF13439: Glyco_transf_4" amino acids 55 to 181 (127 residues), 67.1 bits, see alignment E=6.3e-22 PF13579: Glyco_trans_4_4" amino acids 73 to 175 (103 residues), 40.5 bits, see alignment E=1.1e-13 PF13477: Glyco_trans_4_2" amino acids 76 to 153 (78 residues), 27.2 bits, see alignment E=1.2e-09 PF20706: GT4-conflict" amino acids 141 to 316 (176 residues), 26.6 bits, see alignment E=9.1e-10 PF00534: Glycos_transf_1" amino acids 190 to 353 (164 residues), 116.4 bits, see alignment E=3.2e-37 PF13692: Glyco_trans_1_4" amino acids 194 to 339 (146 residues), 98.6 bits, see alignment E=1.2e-31

Best Hits

KEGG orthology group: None (inferred from 45% identity to tex:Teth514_2283)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (380 amino acids)

>GFF694 D-inositol-3-phosphate glycosyltransferase (Methylophilus sp. DMC18)
MKLVAVFRWQLFKPSEGFIASQVSTMARFKPIFFGGKLFGKAPNYDVYNILTSSSRIVNL
LTYLRLVVLGNVQPFLKLIKTSEIRLIHAHFAMDAVIALPLAKRLRVPFITTLHGMDVTV
SDKNFILSGRPNLIKYVLLRKQLFKTADLFICVSAFIKKKAIERGFPPDKLVVHYIGINT
ELLSPRSGSGENNLVVHVARLVEKKGTIYLIRALALVKQSIPDVKLMIIGDGPLRSELEK
EVADLELSKNVQFLGVQPNSVTVDWVRKSSLLAVPSVTASNGDCEGLPTVIAEAGAQRVP
VVAFNSAGIGEIITHGQTGLLSEERDVIGLKDNLLCLLSSPALREEIGTKARENIEINFD
LKTQSAKLENIYLDLIQAKN