Protein Info for PS417_24210 in Pseudomonas simiae WCS417

Annotation: dolichyl-phosphate-mannose-protein mannosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 477 signal peptide" amino acids 1 to 32 (32 residues), see Phobius details transmembrane" amino acids 79 to 97 (19 residues), see Phobius details amino acids 108 to 126 (19 residues), see Phobius details amino acids 133 to 151 (19 residues), see Phobius details amino acids 159 to 176 (18 residues), see Phobius details amino acids 181 to 199 (19 residues), see Phobius details amino acids 211 to 230 (20 residues), see Phobius details amino acids 263 to 285 (23 residues), see Phobius details amino acids 297 to 315 (19 residues), see Phobius details amino acids 321 to 338 (18 residues), see Phobius details amino acids 359 to 379 (21 residues), see Phobius details PF02366: PMT" amino acids 43 to 228 (186 residues), 56.9 bits, see alignment E=2.3e-19 PF13231: PMT_2" amino acids 59 to 225 (167 residues), 60.9 bits, see alignment E=1.8e-20

Best Hits

KEGG orthology group: None (inferred from 94% identity to pfs:PFLU5317)

Predicted SEED Role

"Polymyxin resistance protein ArnT, undecaprenyl phosphate-alpha-L-Ara4N transferase; Melittin resistance protein PqaB"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1N7UHM9 at UniProt or InterPro

Protein Sequence (477 amino acids)

>PS417_24210 dolichyl-phosphate-mannose-protein mannosyltransferase (Pseudomonas simiae WCS417)
MTRPASLLLLLAGLLFFFALGNHELQGSTEARVAGIAMAMHLDNNWVVPQLFREPFLEKP
PLSLWIDAGAIRLFGGTTWAVRLASAFAGLFSVMLLYTMLRRFGRPQTLAFSAALILATM
ASYWSNARGVGEDSLLTLGVTTALLAFYQAVRPDRQGSSVGAWALFTAGMVIATLSKGVL
GLAMPGIVIFVYLASTSLMDKRLQIGNWLKPALFTLLALVPLVIWLGFLFQRGGMQAVAE
VLLTNSVGRFSGSFVEAGHYEPFYYYIAKLPEAFLPWNILVYLGLWHFRKSLVRNRYHLF
FSVWLVAQFTLLTLASSKRTVYLMALAPAAAVLAAEYARVLLDWLKTHKPALYKHHRTIV
GGVFTLAVSCYLIAAFWFAPKADVRQSFVPVISQVQALKDLGREVVLYRPNERIAGASVF
YLQAYLPILQTEAELHSYLGAKPGNVALLDHTDDLTRPVKEIKRMSINRQPYYFVEQ