Protein Info for PS417_24170 in Pseudomonas simiae WCS417

Annotation: cell division protein FtsK

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1600 1700 1809 PF01580: FtsK_SpoIIIE" amino acids 1565 to 1721 (157 residues), 115.7 bits, see alignment E=1.1e-37

Best Hits

Predicted SEED Role

"Cell division protein FtsK" in subsystem Bacterial Cell Division or Bacterial Cytoskeleton or Bacterial RNA-metabolizing Zn-dependent hydrolases

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1N7UNQ4 at UniProt or InterPro

Protein Sequence (1809 amino acids)

>PS417_24170 cell division protein FtsK (Pseudomonas simiae WCS417)
MLTDRIIGRVGADILAQRISSPHQSGDLAALFRLDKLSANQIAAVARAILASPDLLAQVD
LMIPEALVGGQGLPPDILIPHNAGYVRNNALTSKAAILTANGNEHNLADTLGHVMAIGAK
EMRADPKPWVEATLHSGGISLVSDDRAVFQAALGGLLASSELSLVQLGEFCSAIVEAIAT
HGLPIRDAVGFALPCSGLPRDSTYFSNAKTFAESRKPWHKAFIKLFAQRAPLLKKLRQNG
QALDSEEIAERIDANAAAISDGARQALFAFVAAPAGDQEASDSLAQFEWESDGVYLAFDK
PKEQQLGLAESTIRFFDHECDQEDLIDAESRKLLEDLKSRERRSDFTEEDEEFFVKQRRL
LEQDARLCSRWEKALYGKPIDCNDFLEGFARVVNSLHAGLRDSEGERILRFTVTKGRKEW
RERFNYDAGSYFSAMYRGLKELMGSKIDWKVERMGNANLPDPLFDYEAFFAKEKELRNDK
KNKVRPNVSLSRLALQIKFDVALIQVFKDRETVLAKTQLLWSYKPTVIGLSLAADMRRLL
EKGAVGCTEVPRRLVSKKGGVQNVSLLDTGTLEATYSTDAGSLVPAVNKLPSLRHVIKTR
IKELAQEGRLTAHQQNEVKASWDKFEEDYIKAMEDFVTTGLHGDAVMRQAESYAELLNTL
MAHARGDVCRSRLVSEILSVGTVRIAGDNLAMIIPPWHPERMKGLAVKTRRVAGFATHLL
SSGSILYGDREIFMRELSDEIAHPFYPEIAVLNRNGALALVSESSTINGYSLLESPTRGA
AGAMTDVDPTAAAKQARELLERYVGLQPHEASNLSVVLYNADAAELPLATVRELSSIQEV
GKFQCSVSVRHSDPGKLRRVYGELVNKAGDDPDLPVVSETSDNFISKLRISVSPLSATPS
ESAKGFKAFDVAFLHDVVAREAQTEWLPVQWTNDRPNLDHAPSRWSYRSVSGENELKSTT
FLTCPWQTASGWAYVSAVAAVCRQTDAMPEERFLPARRISLQSPALAAMIKDAHELAEWV
ATYDELLDKRQLQHNNITVVRYRRNSTNGRNMIVSSTSELRLLSVLVRRRLEELNLQLGS
DDLQAAADKAKRDALSVSGDIVLRAAKRGVSAGEMLGLVLSRYLLAEEFQVSANGGQVLT
AYFLLDDYASWLSQPESRIADILALNVEEYEENVRVVISIVESKYVGADGLAQARRGSKD
QLLATLGMFREALFGDPGRLDRDIWLARLADMLLDADIPPGMTGLMERARAKLREGDVEI
SLRGYSHVYVHTSDAGTTSSTEQELLDETDGVMAWQEVFDRPDLRKLAEAYAKGSGGHGV
RSGLGPNQPWSGHRFKLPAPRVPWLAAMAQLSNGRIDTFVEEVSSLDKNGEEAPSTYSAA
TPSVLLEEPALAIVANVDSASGHLPAVTNNFGSGLRDLVASKFSGSAQADSEREEWSQEV
TKKLKSALNSYGLQAAVLGTRLTPNGCLVRLAGSDRLRVEDIENKRTQLLTTHAINLVTV
QPKPGEIVVTVAGGRRQSVSLWELWSRRELNRNVAGINTSFLLGLQEINGALLYLNLGAE
FGGLSSHEPHSLVAGATGSGKSVLIQALILDIAATNPKHLAQIILIDPKMGVDYAPLADL
PHMRDEIVTTKEKAAQVLDALVQEMEDRYRAFAKARARDLPTYNSKVSVAERLPMVFLVH
DEFADWMLDDAYKAAVGAAVQRLGVKARAAGIHLIFAAQRPDKDVMPMQLRENLGNRLIL
KVSSEATSKISLDRPGAELLLGRGHMAAKLNGEQGLVFAQAPFLSDQDIESAVAAIYTDN
AELGETSEG