Protein Info for PS417_02260 in Pseudomonas simiae WCS417

Annotation: serine/threonine protein kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 479 PF06293: Kdo" amino acids 69 to 170 (102 residues), 27.4 bits, see alignment E=2.1e-10 amino acids 329 to 436 (108 residues), 30.9 bits, see alignment E=1.8e-11

Best Hits

KEGG orthology group: None (inferred from 94% identity to pfs:PFLU0468)

Predicted SEED Role

"serine/threonine protein kinase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1N7U188 at UniProt or InterPro

Protein Sequence (479 amino acids)

>PS417_02260 serine/threonine protein kinase (Pseudomonas simiae WCS417)
MRLSELKTAGRTPDLPLTLELADAAGPGQLQLLSLLRVLPGERYVGAAVWRGRPVLAKLL
VGSKAARHFQRELSGVRLLAEQGLTTPLLLADGLQEGEGGWLLFEFIEGAESLADAWQAV
EHLPPLADEQTAVLAEALGAIAQMHTQGLWQEDLHLDNLLRKDGKLYLIDGAGIRVEEAG
KPLSRNRVLENLGVFFAQLPKNLEPFTEELLVYYLLSNGEHALPLEALEKQVRKVSAWRL
KDFLNKVGRECTLFSVVRGAFALRAIRREEESAMLPVLAQADALLDQGHLYKTGGAASVA
KVEVAGRPLVIKRYNIKGFAHWLKRFWRPSRAWHSWREGNRLAFLGIATPKPLAVLEKRF
FWLRSRAYLVTEYLPGPDIIERFAPYIEHGDAPEDELLALDHLFAELIRERISHGDFKGH
NLFWDKDRWSLIDLDAMCQHTSDASFASAYAKDRARFMRNWPSESALYKLIDQRLPAQV