Protein Info for PS417_22600 in Pseudomonas simiae WCS417

Annotation: ATPase AAA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 331 PF20030: bpMoxR" amino acids 25 to 200 (176 residues), 41.6 bits, see alignment E=2.2e-14 PF00158: Sigma54_activat" amino acids 49 to 162 (114 residues), 20.5 bits, see alignment E=9.9e-08 PF07728: AAA_5" amino acids 52 to 180 (129 residues), 52.3 bits, see alignment E=1.9e-17 PF07726: AAA_3" amino acids 52 to 182 (131 residues), 216.4 bits, see alignment E=3.2e-68 PF00004: AAA" amino acids 53 to 164 (112 residues), 28.2 bits, see alignment E=7.1e-10 PF17863: AAA_lid_2" amino acids 249 to 320 (72 residues), 62.4 bits, see alignment E=8.4e-21

Best Hits

KEGG orthology group: K03924, MoxR-like ATPase [EC: 3.6.3.-] (inferred from 97% identity to pfs:PFLU4945)

Predicted SEED Role

"FIG022979: MoxR-like ATPases"

Isozymes

Compare fitness of predicted isozymes for: 3.6.3.-

Use Curated BLAST to search for 3.6.3.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1N7U8A8 at UniProt or InterPro

Protein Sequence (331 amino acids)

>PS417_22600 ATPase AAA (Pseudomonas simiae WCS417)
MSELPSATALNRDTLQRASEQAQALRTELRKAVIGQDAVIDDVLTALIAGGHVLLEGVPG
LGKTLLVRALARCFEGDFARIQFTPDLMPSDVTGHAVYDRHTEQFKLRKGPVFTHLLLAD
EINRAPAKTQAALLEAMQERQVTLEGEALPIGQPFMVLATQNPIEQEGTYPLPEAELDRF
MLKVRMDYPDAQQEVDMVREVTRSSRADMLDVHPLHTVLQAEGVLQLQQIASELALDEHV
LDYAVRLARATRSWPGLAIGAGPRASIDLVRGARARALLRGGEFVTPDDIKGCALAVLRH
RVRIAPELDIDGLEVDQVLKQLLDQIPAPRQ