Protein Info for GFF4281 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
Annotation: Phosphate starvation-inducible protein PsiF
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 91% identical to PSIF_ECOL6: Phosphate starvation-inducible protein PsiF (psiF) from Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
KEGG orthology group: None (inferred from 99% identity to set:SEN0367)Predicted SEED Role
"Phosphate starvation-inducible protein PsiF"
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (106 amino acids)
>GFF4281 Phosphate starvation-inducible protein PsiF (Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868) MKITLLVTLLFGLVFLTAVGATEKPLTPQQQRMTTCNQQATAQALKGDARKTYLSDCLKN SQSAPGEKSLTPQQQKMRECNVQATEQSLKGDDRSKFMSACLKKAA