Protein Info for GFF4274 in Hydrogenophaga sp. GW460-11-11-14-LB1

Annotation: Diacylglycerol kinase (EC 2.7.1.107)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 129 transmembrane" amino acids 42 to 57 (16 residues), see Phobius details amino acids 63 to 83 (21 residues), see Phobius details amino acids 107 to 128 (22 residues), see Phobius details PF01219: DAGK_prokar" amino acids 24 to 123 (100 residues), 110.5 bits, see alignment E=1.6e-36

Best Hits

Swiss-Prot: 48% identical to KDGL_ECOL6: Diacylglycerol kinase (dgkA) from Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)

KEGG orthology group: K00901, diacylglycerol kinase [EC: 2.7.1.107] (inferred from 73% identity to pol:Bpro_2312)

MetaCyc: 48% identical to diacylglycerol kinase (Escherichia coli K-12 substr. MG1655)
Diacylglycerol kinase. [EC: 2.7.1.107]

Predicted SEED Role

"Diacylglycerol kinase (EC 2.7.1.107)" in subsystem Glycerolipid and Glycerophospholipid Metabolism in Bacteria (EC 2.7.1.107)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.1.107

Use Curated BLAST to search for 2.7.1.107

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (129 amino acids)

>GFF4274 Diacylglycerol kinase (EC 2.7.1.107) (Hydrogenophaga sp. GW460-11-11-14-LB1)
MNDQEPVDAQKRRTGLTRMAHAFRYSLAGLRSGWGETAFRQEALASMVMIPAAFWIGRTW
VETALLVASVVLVMVVELLNTGIETAIDRIGPEWHDLSKRAKDMGSAAVLLSLVLCAGIW
IAALWAHWA