Protein Info for GFF422 in Hydrogenophaga sp. GW460-11-11-14-LB1

Annotation: putative Metapyrocatechase (MPC) (CatO2ase) (Catechol 2,3- dioxygenase)( EC:1.13.11.2 )

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 301 PF00903: Glyoxalase" amino acids 11 to 119 (109 residues), 27.4 bits, see alignment E=5.8e-10 amino acids 140 to 249 (110 residues), 51 bits, see alignment E=2.8e-17 PF18029: Glyoxalase_6" amino acids 12 to 122 (111 residues), 23.7 bits, see alignment E=9.6e-09

Best Hits

KEGG orthology group: None (inferred from 58% identity to bam:Bamb_4306)

Predicted SEED Role

"putative Metapyrocatechase (MPC) (CatO2ase) (Catechol 2,3- dioxygenase)( EC:1.13.11.2 )"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (301 amino acids)

>GFF422 putative Metapyrocatechase (MPC) (CatO2ase) (Catechol 2,3- dioxygenase)( EC:1.13.11.2 ) (Hydrogenophaga sp. GW460-11-11-14-LB1)
MSSPWIEAVRSVALNVPDLEKAEAFYTEVWRLSVAHRSEQAIYLRGTGSDHHLLALHAGG
PVPQIRQVTLRARSLDALRAVAEAVPRAGGTLLSPVGPLTNDPAGGTGLTLRDPHGRVLQ
VVHGDARGEDIGPQRDQPARLTHVVLNSHAVDETQRFFTDALGFTLADRTVAIAFMNCNS
DHHTLAVGVADNDALNHIAFLMPDADSVMRGGGRMKDAGHPIEWGPGRHGPGNNLFNYFI
DPFGIVIEYTAEVEQVDESYVPRGPADWKWPPGRVDQWGISPPPGPTLKEAQRRVLFASV
P