Protein Info for GFF3941 in Hydrogenophaga sp. GW460-11-11-14-LB1

Annotation: GCN5-related N-acetyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 251 PF00583: Acetyltransf_1" amino acids 149 to 235 (87 residues), 48.8 bits, see alignment E=1.6e-16 PF13508: Acetyltransf_7" amino acids 162 to 236 (75 residues), 30.6 bits, see alignment E=7.1e-11 PF13673: Acetyltransf_10" amino acids 170 to 237 (68 residues), 26.4 bits, see alignment E=1.2e-09 PF08445: FR47" amino acids 183 to 240 (58 residues), 39.7 bits, see alignment E=8.2e-14

Best Hits

KEGG orthology group: None (inferred from 54% identity to pol:Bpro_2418)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (251 amino acids)

>GFF3941 GCN5-related N-acetyltransferase (Hydrogenophaga sp. GW460-11-11-14-LB1)
MTRTADVEAIERATLQAVAPEVVEAMPGWLLPMDSGTVGRARSAVPLHHEPPDLGLLASI
LARYEDRGFTPAFRLPDLPAFEPFQQALQQQGFERLQPTLTQTAPIEVLQSLEADPAADL
ADTPDAAWMAMFLGEGLDPVDGAIRARSLSRATGTRYASLRENGHTLACGAASFGEGWLG
VHGMRTAAAQRGRGLAARVLRAMAREAAQRGISQAFLQVDASNAPALALYRRLGFSTAWP
YAYWRRALKTG