Protein Info for PS417_19235 in Pseudomonas simiae WCS417

Annotation: GNAT family acetyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 577 TIGR03103: GNAT-family acetyltransferase TIGR03103" amino acids 37 to 577 (541 residues), 889 bits, see alignment E=5.8e-272 PF00583: Acetyltransf_1" amino acids 152 to 245 (94 residues), 53.3 bits, see alignment E=1.3e-17 PF13508: Acetyltransf_7" amino acids 157 to 246 (90 residues), 39.1 bits, see alignment E=3.1e-13 PF08445: FR47" amino acids 188 to 249 (62 residues), 27.6 bits, see alignment E=9.2e-10 PF13673: Acetyltransf_10" amino acids 190 to 250 (61 residues), 24.8 bits, see alignment E=7.4e-09 PF08443: RimK" amino acids 329 to 432 (104 residues), 36 bits, see alignment E=2.2e-12 PF02955: GSH-S_ATP" amino acids 355 to 434 (80 residues), 28.6 bits, see alignment E=3.5e-10

Best Hits

KEGG orthology group: None (inferred from 97% identity to pfs:PFLU4321)

Predicted SEED Role

"Cyanophycin synthase (EC 6.3.2.29)(EC 6.3.2.30)" in subsystem Cyanophycin Metabolism (EC 6.3.2.29, EC 6.3.2.30)

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 6.3.2.29 or 6.3.2.30

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1N7U6J3 at UniProt or InterPro

Protein Sequence (577 amino acids)

>PS417_19235 GNAT family acetyltransferase (Pseudomonas simiae WCS417)
MKPHAAAYSQRLLKGQAPTYERLQARLAEDGSPLAAEPIAVHCGWGRLLIGHTFPDPASL
AQELLNEQAGERDIALYVAAPQQILGIDPQQLFLDPSDTLRLWFSDYRPATRVFRGFRIR
RVQSEADWLAVNQLYQGRGMLPVDAERLTPRHQGGPVYWLAEDEDSGAVIGSVMGLNHQK
AFHDPENGCSLWCLAVDPQCTRPGVGEVLVRHLVEHFMSRGLSYLDLSVLHDNRQAKNLY
AKLGFRALTTFAIKRKNGINQPLFLGPGPQAGFNPYARIIVEEAHRRGIDVQVDDADAGL
FTLSHGGRRVRCRESLSDLTSAISMTLCQDKSLTHKVLKAAGLKLPSQQLAGSADDNLDF
LDEHQRIVVKPLDGEQGQGVAVDLQSIEEVQQAIETARQFDSRVLLESFHEGLDLRILVI
GFEVVAAAIRRPAEVTGDGHHSIGALIEAQSRRRQAATDGESKIPLDGETERTLQAAGFD
YSSILPRGQTLAVRRTANLHTGGCLEDVTDILHPTLVDAAVRAARALDIPMVGLDLMVPA
ADQPEYVFIEANERAGLANHEPQPTAEKFVDLLFPHS