Protein Info for GFF3588 in Hydrogenophaga sp. GW460-11-11-14-LB1
Annotation: Imidazolonepropionase (EC 3.5.2.7)
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 67% identical to HUTI_POLSJ: Imidazolonepropionase (hutI) from Polaromonas sp. (strain JS666 / ATCC BAA-500)
KEGG orthology group: K01468, imidazolonepropionase [EC: 3.5.2.7] (inferred from 66% identity to ect:ECIAI39_0691)MetaCyc: 61% identical to imidazolonepropionase (Pseudomonas fluorescens)
Imidazolonepropionase. [EC: 3.5.2.7]
Predicted SEED Role
"Imidazolonepropionase (EC 3.5.2.7)" in subsystem Histidine Degradation (EC 3.5.2.7)
MetaCyc Pathways
- L-histidine degradation VI (7/8 steps found)
- L-histidine degradation I (4/4 steps found)
- L-histidine degradation II (4/5 steps found)
- L-histidine degradation III (4/6 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 3.5.2.7
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (413 amino acids)
>GFF3588 Imidazolonepropionase (EC 3.5.2.7) (Hydrogenophaga sp. GW460-11-11-14-LB1) MTATTLWRNARLATLDPNQGSDGWGLIEQGALLTDGGRIAWVGALADLPAQARPGREMDL GGALVTPGLVDCHTHLVYGGQRAAEFEQRLTGVSYEAIARAGGGIRSSVAATRAASEAQL LASARERARCLMAEGVTTLEIKSGYGLSLEAEARCLRVARRLGAELPLTVRTTFLGAHAV PPEFDGQPNRYIDAVCDWLPELHAQGLVDAVDAFCERIGFSPAQTRQVFDTAAGLGLPVK LHAEQLSDQDGAALAASYGALSCDHLEHLSAEGIAAMRAAGTVAVLLPGAYYFLRETRRP PIEALRAAGVPMAVSTDHNPGTSPGLSLLLMASMACTLFRLTPLEAVQGITVHAARALGL ADRGRLAADQRADFVAWQLEHPNELAYWFGRNPCHRVVVAGRERTLDGHAAPL