Protein Info for GFF3326 in Hydrogenophaga sp. GW460-11-11-14-LB1

Annotation: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 294 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details TIGR01099: UTP--glucose-1-phosphate uridylyltransferase" amino acids 3 to 270 (268 residues), 358.1 bits, see alignment E=1.6e-111 PF00483: NTP_transferase" amino acids 10 to 273 (264 residues), 100 bits, see alignment E=8.2e-33

Best Hits

Swiss-Prot: 50% identical to GTAB_STAEQ: UTP--glucose-1-phosphate uridylyltransferase (gtaB) from Staphylococcus epidermidis (strain ATCC 35984 / RP62A)

KEGG orthology group: K00963, UTP--glucose-1-phosphate uridylyltransferase [EC: 2.7.7.9] (inferred from 69% identity to adk:Alide2_1638)

MetaCyc: 50% identical to UTP-glucose-1-phosphate uridylyltransferase (Bacillus subtilis subtilis 168)
UTP-monosaccharide-1-phosphate uridylyltransferase. [EC: 2.7.7.64, 2.7.7.9]

Predicted SEED Role

"UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9)" (EC 2.7.7.9)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.7.64 or 2.7.7.9

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (294 amino acids)

>GFF3326 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (Hydrogenophaga sp. GW460-11-11-14-LB1)
MTIRKAVFPVGGLGTRFLPATKAIPKEMLPVVDKPLMQYAVEEAYAAGIREMIFVTGRHK
RAIEDHFDTAYELEMELEAAGKSALLELVHSIKPDDMDCVYVRQPRALGLGHAVLCAERL
VGNEPFAVLLADDLMMGQDQAQGGATVLQQMVQAYESSPGTVLAVQDVPRAETRRYGVVD
VHGANQALAEVFAMVEKPAPDVAPSTLAVAGRYILTPAVFESIRRQPRGAGGEIQLTDGI
AALIGQEKVQAFRYAGKRYDCGSKEGFLEATIDLALANAELSASVRAHLKRLDV