Protein Info for GFF3304 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Annotation: Phosphate starvation-inducible protein PhoH, predicted ATPase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 262 PF02562: PhoH" amino acids 57 to 261 (205 residues), 261.2 bits, see alignment E=1.2e-81 PF13604: AAA_30" amino acids 61 to 215 (155 residues), 27.8 bits, see alignment E=4.1e-10 PF13245: AAA_19" amino acids 73 to 214 (142 residues), 26.1 bits, see alignment E=1.7e-09

Best Hits

KEGG orthology group: K06217, phosphate starvation-inducible protein PhoH and related proteins (inferred from 100% identity to sec:SC1077)

Predicted SEED Role

"Phosphate starvation-inducible protein PhoH, predicted ATPase" in subsystem Phosphate metabolism

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (262 amino acids)

>GFF3304 Phosphate starvation-inducible protein PhoH, predicted ATPase (Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868)
MGRQKAVIKARREAKRVLRRDSRSHKQREEESVTSLVQMGGVEAIGMARDSRDTSPVKAR
NEAQAHYLNAIDSKQLIFATGEAGCGKTWISAAKAAEALIHKDVERIIVTRPVLQADEDL
GFLPGDIAEKFAPYFRPVYDVLLKRLGASFMQYCLRPEIGKVEIAPFAYMRGRTFENAVV
ILDEAQNVTAAQMKMFLTRLGENVTVIVNGDITQCDLPRGVRSGLSDALERFEEDEMVGI
VHFNKDDCVRSALCQRTLHAYS