Protein Info for GFF3157 in Hydrogenophaga sp. GW460-11-11-14-LB1

Annotation: Filamentation induced by cAMP protein Fic

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 514 PF02661: Fic" amino acids 271 to 332 (62 residues), 37.5 bits, see alignment E=1.8e-13

Best Hits

KEGG orthology group: None (inferred from 63% identity to ppg:PputGB1_2191)

Predicted SEED Role

"Filamentation induced by cAMP protein Fic"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (514 amino acids)

>GFF3157 Filamentation induced by cAMP protein Fic (Hydrogenophaga sp. GW460-11-11-14-LB1)
MHVGFKALEAAHGLRLTQPLRVVSSIGTTRFSKHAPELDQNQYTPGYRPEDSFAGHFGFG
LKYEEVHLEFLARLFAATGPEPIAAWCRKEPTGKYARRAGFFYEWLTGTRLEVPDLTNGA
YIPAVDATAYLTRTEAERDKRWRVDNNLPGNRNFCPLVRRTAALQEALTFDPAAALAELD
NEFGEDVLMRAAAWLTLKESRASFLIENEADKTDRIKRFAHVIGEHCGKLADPMSDASLL
VLQGGILGEAVLSKGLRRSPVFVGQSSIHGDIVHYIAPHFDDVAGMRDGLIEFERATRGQ
EALARAAAIAFGFVYVHPMSDGNGRIHRFLINDTLQRDGAVPEGIILPVSAGITNTREFG
HGYDRTLEVFSRPFMRRYAEAHWFGTLITYADGVKSNLVFDDYAGANHAWRYPDLTEHAV
YTARLVAHTIRIEMAEEARMLLMFQLAQRRIKDVMEMPDPDAARIIRSIKDNNWQVSGKL
VREYPQLEDRLLSLRMVEAVQSAFEGREPAPIIG