Protein Info for GFF2995 in Hydrogenophaga sp. GW460-11-11-14-LB1

Annotation: phosphoesterase, PA-phosphatase related

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 219 transmembrane" amino acids 21 to 41 (21 residues), see Phobius details amino acids 61 to 81 (21 residues), see Phobius details amino acids 93 to 113 (21 residues), see Phobius details amino acids 138 to 158 (21 residues), see Phobius details amino acids 170 to 187 (18 residues), see Phobius details amino acids 193 to 212 (20 residues), see Phobius details PF14378: PAP2_3" amino acids 56 to 209 (154 residues), 43.3 bits, see alignment E=3.9e-15 PF01569: PAP2" amino acids 129 to 217 (89 residues), 41.8 bits, see alignment E=8.8e-15

Best Hits

KEGG orthology group: None (inferred from 55% identity to dar:Daro_4168)

Predicted SEED Role

"phosphoesterase, PA-phosphatase related"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (219 amino acids)

>GFF2995 phosphoesterase, PA-phosphatase related (Hydrogenophaga sp. GW460-11-11-14-LB1)
MPTPTERAWYRQLLSRFITLWYLKAFGTMAFMVLFFQGYFWVLHHPMAAPLMMPTLAVDD
WVPFLPSAFYAYVSLWVYVSLPPALMPNLRELLRYGLWVGALCLFCLALFWLVPTQTPLT
DIDWAQHPRLAFLKGIDASGNACPSLHVGSAVFSAFWFQRIFRQTGAPAALRWLSVLHCA
VIIWSTMAIRQHVFLDVLAGAAVGAVFAWLALRFSPTKA