Protein Info for GFF2920 in Hydrogenophaga sp. GW460-11-11-14-LB1

Annotation: Histone acetyltransferase HPA2 and related acetyltransferases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 158 PF00583: Acetyltransf_1" amino acids 48 to 137 (90 residues), 54.6 bits, see alignment E=2.6e-18 PF13508: Acetyltransf_7" amino acids 53 to 139 (87 residues), 49.6 bits, see alignment E=8.7e-17 PF13673: Acetyltransf_10" amino acids 55 to 142 (88 residues), 30.4 bits, see alignment E=6.9e-11 PF08445: FR47" amino acids 79 to 140 (62 residues), 25.6 bits, see alignment E=2e-09

Best Hits

KEGG orthology group: None (inferred from 68% identity to pol:Bpro_0267)

Predicted SEED Role

"Histone acetyltransferase HPA2 and related acetyltransferases"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (158 amino acids)

>GFF2920 Histone acetyltransferase HPA2 and related acetyltransferases (Hydrogenophaga sp. GW460-11-11-14-LB1)
VISLRPAQFPDDLQTVRQLFLEYQAGLGIDLCFQGFEAELAELPGAYAPPVGTLLLACID
GEPAGCCAMRPLYNTDHLNACEMKRLFVRPAFRGFGLGRLLVERVMSDGQLAGYTTMLLD
TLSDMETARALYQEVGFVEVAPYYHNPIPGAHYLKVDL