Protein Info for PS417_01475 in Pseudomonas simiae WCS417

Annotation: cell division protein FtsQ

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 306 TIGR03371: cellulose synthase operon protein YhjQ" amino acids 59 to 301 (243 residues), 200.8 bits, see alignment E=1.2e-63 PF10609: ParA" amino acids 59 to 209 (151 residues), 33.2 bits, see alignment E=9.4e-12 PF13614: AAA_31" amino acids 59 to 215 (157 residues), 46.9 bits, see alignment E=8e-16 PF06564: CBP_BcsQ" amino acids 59 to 295 (237 residues), 98.5 bits, see alignment E=1.1e-31 PF01656: CbiA" amino acids 61 to 272 (212 residues), 37.2 bits, see alignment E=6.8e-13

Best Hits

KEGG orthology group: None (inferred from 72% identity to pfs:PFLU0309)

Predicted SEED Role

"Cellulose synthase, putative"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1N7UBE1 at UniProt or InterPro

Protein Sequence (306 amino acids)

>PS417_01475 cell division protein FtsQ (Pseudomonas simiae WCS417)
MSLANEFFVLFGKNVTRDAQGLNARLHFFGSIPVEDGSPVSSTREDVPSMNVRAARPTVV
ALVSVNGGVGRSTLATALSSGLQRQGESVVALDLDPQNALRHHFGVSPDAEGLGPASLQN
AQWAAIQQPGFAGCKVITFGSTSTRQQESLQRWLTHEPDWLARRLEDLSLGARHTLIIDT
PAGNNVYFQQALSVADVVLVVTQADAASLATLDQLDALLAPHLKRERPPRVHFVVNQVDE
CNAFSLDMVEAFKQRLGSTLYEVHRDVVISESLAFSTDPLDSQSMRLAADDINDLCRLLR
VSKKYV