Protein Info for PS417_01145 in Pseudomonas simiae WCS417

Annotation: taurine transporter ATP-binding subunit

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 259 PF00005: ABC_tran" amino acids 21 to 160 (140 residues), 107 bits, see alignment E=6.3e-35

Best Hits

Swiss-Prot: 92% identical to TAUB_PSEF5: Taurine import ATP-binding protein TauB (tauB) from Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)

KEGG orthology group: K02049, sulfonate/nitrate/taurine transport system ATP-binding protein (inferred from 98% identity to pfs:PFLU0254)

MetaCyc: 61% identical to taurine ABC transporter ATP binding subunit (Escherichia coli K-12 substr. MG1655)
ABC-64-RXN [EC: 7.6.2.7]

Predicted SEED Role

"Taurine transport ATP-binding protein TauB" in subsystem Taurine Utilization

Isozymes

No predicted isozymes

Use Curated BLAST to search for 7.6.2.7

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1N7U5E8 at UniProt or InterPro

Protein Sequence (259 amino acids)

>PS417_01145 taurine transporter ATP-binding subunit (Pseudomonas simiae WCS417)
MALLQLERISAQYPGATEPVLSDISLDLGPQQLLVALGPSGSGKTSLLNLIAGFVEPSAG
RITLDGVPVKGPSAERGVVFQDDALLPWQDVLANVGFGLELAGVSKAQREVRAREMLALV
DLVGFDSRRIWQLSGGQKQRVGLARALAADPRVLLMDEPFGALDAFTREQMQELLLQVWR
RTAKPVFLITHDIEEAVFLATDLMLLAPNPGQIVERLSLDFGQRYAAGESARAIKSDPRF
IETREHVLGKVFSQRQVSA