Protein Info for PS417_09275 in Pseudomonas simiae WCS417

Annotation: peptidase S15

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 669 TIGR00976: hydrolase CocE/NonD family protein" amino acids 21 to 504 (484 residues), 229.2 bits, see alignment E=6.4e-72 PF02129: Peptidase_S15" amino acids 23 to 274 (252 residues), 234.7 bits, see alignment E=3.8e-73 PF00326: Peptidase_S9" amino acids 66 to 150 (85 residues), 29.1 bits, see alignment E=1.8e-10 PF12146: Hydrolase_4" amino acids 67 to 149 (83 residues), 28.5 bits, see alignment E=2.3e-10 PF00561: Abhydrolase_1" amino acids 71 to 212 (142 residues), 49.6 bits, see alignment E=1.1e-16 PF08530: PepX_C" amino acids 321 to 518 (198 residues), 122.4 bits, see alignment E=7.2e-39

Best Hits

KEGG orthology group: K06978, (no description) (inferred from 94% identity to pfs:PFLU2022)

Predicted SEED Role

"Mll5128 protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1N7U1T9 at UniProt or InterPro

Protein Sequence (669 amino acids)

>PS417_09275 peptidase S15 (Pseudomonas simiae WCS417)
MEIVTEFAYTVREIEHCLIPLKDGTQLAARIWLPEVAGLQTFPAILEYLPYRKRDGTAVR
DALTHPWMAGQGYVCVRVDMRGNGESQGLMADEYLLQEQEDALEVIDWLCRQPWCDGNVG
MMGISWGGFNGLQVAARQPEALKAIITLCSTDDRYADDIHYKGGNLLMENFGWAATMLNF
SAAVPDPLLVGDDWKDLWHQRLDAMPLLAETWLQHQTRDDYWRHGSVCEDYAKIKAAVYA
VGGWGDAYRNTVSRLMQNLPGPKKAMIGPWIHKYPHFAVPNPAIGFLQEAKRWWDHWLKG
IENGVMDDASCTFYLQDILPPKGSYAERPGIWVQTSGWPDSQVQWTDFSLGEHGLSTGAQ
PLAAPRSICSPLTTGLHQGEYCAIWFGPDGPTDQRRDDAQSLCFDSQPLTEPLSLLGDAR
LKLRLASDTSCGQLVARLNAIAPDGQVTQVSYGVLNLTLREDFSQVTPVVPGQPMDVQLN
LDHIGMRLPAGYRLRLALSTASFPLLWPSRELTTLTLLPGLQSLQLPVFTGEAVECPFEA
PQSATPVAMEVLRGAAPKRTLIEDVGSGEVCVKIEDDLGSVRFTDHGLSVDQRCTEQYRT
LPWDPLSTRADIEWHYCVGRDQWAVEVESHLSVHADAEWFYIEAEQTAWENGQLEHRRQW
SKRVARVAL