Protein Info for PS417_09230 in Pseudomonas simiae WCS417

Annotation: glycerol acyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 624 signal peptide" amino acids 1 to 29 (29 residues), see Phobius details transmembrane" amino acids 52 to 72 (21 residues), see Phobius details amino acids 84 to 104 (21 residues), see Phobius details amino acids 110 to 128 (19 residues), see Phobius details amino acids 147 to 167 (21 residues), see Phobius details amino acids 173 to 191 (19 residues), see Phobius details amino acids 233 to 252 (20 residues), see Phobius details amino acids 264 to 283 (20 residues), see Phobius details amino acids 295 to 314 (20 residues), see Phobius details amino acids 335 to 360 (26 residues), see Phobius details amino acids 377 to 398 (22 residues), see Phobius details amino acids 404 to 424 (21 residues), see Phobius details amino acids 428 to 428 (1 residues), see Phobius details amino acids 457 to 474 (18 residues), see Phobius details amino acids 488 to 506 (19 residues), see Phobius details PF07690: MFS_1" amino acids 19 to 387 (369 residues), 52.3 bits, see alignment E=4.3e-18 PF01553: Acyltransferase" amino acids 442 to 570 (129 residues), 87.3 bits, see alignment E=8.3e-29

Best Hits

KEGG orthology group: None (inferred from 97% identity to pfs:PFLU1874)

Predicted SEED Role

"1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)" in subsystem Glycerolipid and Glycerophospholipid Metabolism in Bacteria or Phosphate metabolism (EC 2.3.1.51)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.3.1.51

Use Curated BLAST to search for 2.3.1.51

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See U1T054 at UniProt or InterPro

Protein Sequence (624 amino acids)

>PS417_09230 glycerol acyltransferase (Pseudomonas simiae WCS417)
MSHPSQFTLLRTRRFLPFFITQLLGAFNDNIFKQSLILAILYKLTIDGDRSIWVNLCALL
FILPFFLFSALAGQFGEKFNKDALIRAIKIGEIVIMAVGATGFLTNHLEMMLLALFAMGT
HSALFGPVKYSIMPQALHDDELVGGNGLVEMGTFLAILAGTIGAGIMMSSTHYAPVVSVA
IVGVAVLGYLASRSIPRAAASTPGLRLNWNIFSESWATLRLGLGQTPAVSRSIVGNSWFW
FVGAIYLTQIPAYAKEWLYGDETVVTLILTVFSVGIALGSMLCEKLSGRKVEIGLVPFGS
FGLTVFGLLLWWHSGGFPQNVQANDWLAVLSYGQAWWVLFDILGLGVFGGFYIVPLYALI
QSRTAENERARVIAANNILNALFMVVSAIVSILLLSVAKLSIPELFLVVSLLNIAVNTYI
FKIVPEFTMRFMIWLLSHSMYRVEHRNLEAIPDEGAALLVCNHVSFVDALLIGGAVRRPI
RFVMYYKIYRLPVLNFIFRTAGAIPIAGRHEDIQIYEKAFTRIAQYLKEGELVCIFPEGK
LTADGEMNEFRGGVTRILEETAVPVIPMALQGLWGSFFSRDPNKGFFHRIWSRVVLVAGE
PVTVEAATPAQLQERVGVLRGSVR