Protein Info for PS417_07445 in Pseudomonas simiae WCS417

Annotation: peptidase S9

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 680 PF02897: Peptidase_S9_N" amino acids 13 to 404 (392 residues), 266.5 bits, see alignment E=4e-83 PF00326: Peptidase_S9" amino acids 463 to 678 (216 residues), 229.7 bits, see alignment E=2.9e-72

Best Hits

KEGG orthology group: K01354, oligopeptidase B [EC: 3.4.21.83] (inferred from 94% identity to pfs:PFLU1529)

Predicted SEED Role

"Protease II (EC 3.4.21.83)" (EC 3.4.21.83)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.4.21.83

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1N7U127 at UniProt or InterPro

Protein Sequence (680 amino acids)

>PS417_07445 peptidase S9 (Pseudomonas simiae WCS417)
MSVSTAPIARKAQGPDPYAWLQVRDSAEVLDYLKAENAWQEAQLADQAALRETLFEEIKG
RILETDLSLPSPWGPYLYYTRTTAGDEYARHYRCRRPADDSNQVDDSSEELLLDPNELAN
GGFFSLGAFSISPDHQRLAYSLDTSGEEIYTLYVKELATGKVSELEFEHCDGTMTWANDS
LTLFFGELDDTHRPHKLYRYRLDGTAAQEVFHEPDGRFFLHCYRSSSERQLLLSLGSKTT
SEVWALDADQPQLDFTCLAPRVEDHEYDVDHGQLNGAWTWFIRSNRDGINYALFVATDIG
DVPTEAEWQNLIPHSDEVMLDGVSLNTHAMTLSLRIGGLPVIEVHPQGLPAYRVELPDAA
YSLYVQNSLEFVSDKIRLRYEALNRPAQVRQLELASGAQQVLKETPVLGVFNADDYVSQR
LWATSADGTQVPISLVVKRDQLGKATPLYLYGYGAYGSSLDPWFSHARLSLLERGVAFAI
AHVRGGGELGEAWYRNGKQAHKQNTFSDFIACAEHLIAEGLTTSKQLAISGGSAGGLLIG
AVLNQRPELFQAAIAEVPFVDVLNTMLDPELPLTITEYDEWGNPEEPDVYARIKAYAPYE
NVRAQGYPHLLVIAGYNDSRVQYWEAAKWVAKLRDTKTDDNLLLLKTELGAGHGGMSGRY
QGLRDVALEYGFVFKALGLV