Protein Info for GFF1451 in Hydrogenophaga sp. GW460-11-11-14-LB1

Annotation: Flagellar motor switch protein FliG

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 332 TIGR00207: flagellar motor switch protein FliG" amino acids 5 to 331 (327 residues), 363.5 bits, see alignment E=6.2e-113 PF14842: FliG_N" amino acids 5 to 103 (99 residues), 109.6 bits, see alignment E=2.3e-35 amino acids 125 to 217 (93 residues), 26.4 bits, see alignment E=1.7e-09 PF14841: FliG_M" amino acids 115 to 182 (68 residues), 84.6 bits, see alignment E=8.8e-28 PF01706: FliG_C" amino acids 215 to 322 (108 residues), 139.3 bits, see alignment E=1.1e-44

Best Hits

Swiss-Prot: 48% identical to FLIG_PSEAE: Flagellar motor switch protein FliG (fliG) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

KEGG orthology group: K02410, flagellar motor switch protein FliG (inferred from 76% identity to adn:Alide_3856)

Predicted SEED Role

"Flagellar motor switch protein FliG" in subsystem Bacterial Chemotaxis or Flagellum

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (332 amino acids)

>GFF1451 Flagellar motor switch protein FliG (Hydrogenophaga sp. GW460-11-11-14-LB1)
MEDQGIQDAAIFLMSLGEEEAAEVFKHLSPKEVQKLGETIAKTRAVSHERVDQVMQKFTN
AASSQSLLVSDTDNYVRAVLKRALGDDKASLLIDRILQGGDVSGIESLKWMDPLSIAELL
RNEHPQIVAAILVHLESDQTAGVLKNFTERTRNEVMLRIATLEGIQPTALKDLNEVLYKV
LAGGDKIRKTSMGGVKTAAEIINMMGTQIETSVIESIREFDADLAQKIMDKMFTFEDLLK
LDGKSVQTVLKEVATDSLVIALKGATNELRDLVLGNMSSRAAEALREDLESRGPVRLSEV
EAQQKEILKVVRRLSDEGQIVIMGGGEDEAFV