Protein Info for GFF1404 in Hydrogenophaga sp. GW460-11-11-14-LB1

Annotation: Flagellar hook-associated protein FlgL

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 405 TIGR02550: flagellar hook-associated protein 3" amino acids 2 to 403 (402 residues), 202.6 bits, see alignment E=6.6e-64 PF00669: Flagellin_N" amino acids 5 to 135 (131 residues), 64 bits, see alignment E=1.6e-21 PF21158: flgK_1st_1" amino acids 200 to 284 (85 residues), 26.9 bits, see alignment E=4.2e-10

Best Hits

KEGG orthology group: K02397, flagellar hook-associated protein 3 FlgL (inferred from 41% identity to mpt:Mpe_A3063)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (405 amino acids)

>GFF1404 Flagellar hook-associated protein FlgL (Hydrogenophaga sp. GW460-11-11-14-LB1)
MRIATAHTYDNTIAILTRRQAELAAQQERVSTGLRVQKASDDPVAATLAETAANRLARTT
ADMRALEASRASLQQAESGLKESGDLIQRVRDLLVTAGNATFTDAEREDVAKQLEGLREQ
LIAVANRKDNAGRTLYGGLGGSSTPFVDAYGPTGAGVQFGGQRGQAAAGNTSLPQALDGD
AIWMRVPQGNGTFTLGVPAGNTGNVSTTVGNVTDATAFTGDDYDITFAEVGGVMQYTVTN
TTTGTPVPGHIGQPYVANKSIEFDGVSLEMRGTPKAGDRVELRPVTDTTDIFSVVQSAVD
ALRYNGPNESAYHAQAMARALTEVDAGHDRVLAARGRAGEWLNRADSLNTQMEDGSIALK
TENARLVELDPIKGLSDLQTQQLGLEAAIKTYAQVQRLSLFQVIN