Protein Info for PS417_07055 in Pseudomonas simiae WCS417
Annotation: hypothetical protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
No protein families (PFam or TIGRFam), signal peptides, or transmembrane helices were found in this protein.
Best Hits
KEGG orthology group: None (inferred from 85% identity to pfs:PFLU1445)Predicted SEED Role
No annotation
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A1N7TZ22 at UniProt or InterPro
Protein Sequence (1053 amino acids)
>PS417_07055 hypothetical protein (Pseudomonas simiae WCS417) MGNDEELSKNPDQRLIKLSEGRSLLTPYSSTRPLKKTPSVQRTFIDRRYLVPPPSDLSLN STQAFKKVHLEDLVLYIPASTRPVQGYDAGINLVAITTHEEGLLIGLLPFLEAAALDFVE LFWGSLTDPVASTTIQQHEVDNAEVIPLFVPSSSITDGNTYPVFFRVTRLGQAVGETRKF ALKVDKVKPGGDNPDGDRFVNTNLLKPIIPQEFLDFGVTEDDAQNCIEIRVPYYPADTSL SPRTYRAVRDVVRLKIGDALFEHSVSQEEQGNHDDIVFKLCIEHWRQIGSGHHVAEWNVI DECGNYSDGWSVAEFLLVYLNDGSEPLLPHCFFSEAPEDILDLDHVVGDFVNIVVLIANN GYQLGDVIKVTLIGKTLRGQTVRKTYSSDPLTSTTTRQLKIPCPVSDLIPLIKGEARLSY ERIRFGAQNRGSHLTPVTIIGTAIPGGLRAPIFREAVDGILPADTTIINIDILKYDDQDY FDRITLKLLGRYPNGKFYYHEESKNAGVGNVVFSIINGPEGDIAKLAGGSLTASYTRQNS EGPLPSPDTTVSISASTAVLPEPRVHEAPPPDYVFDSNQSTGDATIEVDPHSDIIEGDTV ILHAEGYVPGGSAPPQPFFVSDTWKDRPLPFTLKRQYILLNQNMNIFYERSRPGVAPRIS NTVHMRVLAARHLPAPFVYNSTPVDDENATINPVIADNTAQVTVRVQFAPMSSNDLIKLE LQGNPGATLPSIAPQYGNPTAGFVDFKFSNSVIGDHIGSVLRLQYHVTTNGITDDSRVLN LRVLDFDEVPGGNPLPQPRLNGLPPGSKIDLNAFNTDCWVSLAPWTLSRKDQRIWLKLHS VGATPLTLLNGHLIDQTQADNGIVNEKAMRSWFTALTDESKVTVSAAVTFNGDTNELNAK PFPSSNYFIQALRFYDLTDFELLSWNQWVNIVSSLGLIRNVNNNNFWFVKLNNGSPITPG VIKSFFIKSGKTYDLSFKMKVDLNPYQPFVYMEFGTQSEHFLHNNPGVWTSHSRTFALPA GVPSQFLPIRIYFKSGFSGAEFSLDDILVVERP