Protein Info for PS417_06810 in Pseudomonas simiae WCS417

Annotation: hemolysin

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 251 PF13444: Acetyltransf_5" amino acids 33 to 133 (101 residues), 99.6 bits, see alignment E=7.6e-33

Best Hits

KEGG orthology group: None (inferred from 100% identity to pfs:PFLU1392)

Predicted SEED Role

"Putative hemolysin"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A1N7UHG6 at UniProt or InterPro

Protein Sequence (251 amino acids)

>PS417_06810 hemolysin (Pseudomonas simiae WCS417)
MTQIARISDTGNERRLQAERLVGAQALQEAQALRFNVFSGEFNAKLKGAELGLDMDDYDV
HCSHIGVRDLNSGRLVATTRLLDHQAASTLGRFYSEEEFSLHGLLHLQGPILEIGRTCVD
PAYRNGGTIAVLWGELAEVLNQGGYSYLMGCASIPMHDGGIQAHAIMQRLRERYLCNEHL
RAEPKKPLPALDLPSNVIAEMPPLLKAYMRLGAKICGEPCWDEDFQVADVFILLKRDELC
PRYARHFKAAM