Protein Info for GFF1234 in Hydrogenophaga sp. GW460-11-11-14-LB1

Annotation: Glyoxalase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 152 PF00903: Glyoxalase" amino acids 10 to 122 (113 residues), 51.2 bits, see alignment E=1.6e-17 PF18029: Glyoxalase_6" amino acids 12 to 122 (111 residues), 37.8 bits, see alignment E=2.7e-13

Best Hits

KEGG orthology group: None (inferred from 68% identity to hoh:Hoch_2580)

Predicted SEED Role

"Glyoxalase family protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (152 amino acids)

>GFF1234 Glyoxalase family protein (Hydrogenophaga sp. GW460-11-11-14-LB1)
MKIEEVFAYLCVSDAKAAIAFYGNAFGATEKFRLTEPSGRVGHAEMAFGPMTVMLSDEYP
EYGIRSATAIGATPVSIHLHVDNADRMIEQALKAGATLEREAQDAFYGERSGVVRDPFGH
RWLIGHAIEDVSTDEMQRRYTALMNTDDTARD