Protein Info for GFF1122 in Variovorax sp. SCN45
Annotation: Molybdenum cofactor guanylyltransferase (EC 2.7.7.77)
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 71% identical to MOBA_ACISJ: Molybdenum cofactor guanylyltransferase (mobA) from Acidovorax sp. (strain JS42)
KEGG orthology group: K03752, molybdopterin-guanine dinucleotide biosynthesis protein A (inferred from 77% identity to vpe:Varpa_2518)Predicted SEED Role
"Molybdopterin-guanine dinucleotide biosynthesis protein MobA" in subsystem Molybdenum cofactor biosynthesis
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (219 amino acids)
>GFF1122 Molybdenum cofactor guanylyltransferase (EC 2.7.7.77) (Variovorax sp. SCN45) MTQAPAMPAHAIAPADITGLLLAGGRGSRMGGVDKGLQPFNGEPLALHAIRRLRPQVGAL MLNANRNLKDYEAFGARVHADILADYPGPLAGFLTGLVHCRTPWLLTVPCDTPLFPPDLA ARLAEAAATGDAEIAMAVAPEASETEGAAPVLRPQPVFCLLRADLLDSLRRYTEAGGRKV QAWAAQHRTVRVPFDRPGDAPDAFFNANTLAELHALENR