Protein Info for GFF108 in Methylophilus sp. DMC18

Annotation: NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 270 PF07357: DRAT" amino acids 13 to 266 (254 residues), 313.1 bits, see alignment E=6.4e-98

Best Hits

KEGG orthology group: K05951, NAD+---dinitrogen-reductase ADP-D-ribosyltransferase [EC: 2.4.2.37] (inferred from 54% identity to rpt:Rpal_1616)

Predicted SEED Role

"NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase (EC 2.4.2.37)" (EC 2.4.2.37)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.4.2.37

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (270 amino acids)

>GFF108 NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase (Methylophilus sp. DMC18)
MQAEESPQDWYSTNLVGLPAGLLGSVAFNRHPQPLHIAGARETHGGLFRLLHASHNAEEA
ADRFAHYMAIAFDLQRPATAQGPRRFRPSYLKLLEGWGFDANSPQGAVLKGWVESRFGLA
PSFHRAPLRHFPSPAWVTYLEEKFCSRFHNYSIHMQLDLLYEYCQFVIARFGLPTSHPTL
TLWRGVNLNEEPTLGQHGLRAGLCRLRLNNLVSFTRNRERADEFGDWILQVEVPLVKLLL
FPGLLQHSPLGGEEEVIALGGEYEVMARYA