Protein Info for GFF1037 in Hydrogenophaga sp. GW460-11-11-14-LB1

Annotation: Esterase/lipase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 266 PF20434: BD-FAE" amino acids 11 to 113 (103 residues), 84.6 bits, see alignment E=1.1e-27 PF00135: COesterase" amino acids 11 to 108 (98 residues), 48 bits, see alignment E=1.5e-16 PF07859: Abhydrolase_3" amino acids 25 to 156 (132 residues), 68.6 bits, see alignment E=1e-22

Best Hits

KEGG orthology group: None (inferred from 43% identity to rpb:RPB_3106)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (266 amino acids)

>GFF1037 Esterase/lipase (Hydrogenophaga sp. GW460-11-11-14-LB1)
VPHGQHARQVLDVFAPEGANDLPILVFVHGGAFVRGEKDQTPWVHANVPAEFSRHGFLAF
NVEYRLAPQASWPAGAQDVRDALLWIAQHAGKWGGDPNRILLMGHSAACAHCASAVWDDR
VLPPEGLPVADLVLVSPRVVADTRAENPNAHGVRAYYGEDQALYAGREPMGLVRPDAPPT
LIALAQYENPLLDFYALELAYRLAAVADRQKGPMPRVIQLMAHNHVSLVAQFNTPCNGLG
EQIRDWFERVLRGEFGARNHPSALSA