Protein Info for Echvi_4615 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: Outer membrane protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 498 signal peptide" amino acids 1 to 25 (25 residues), see Phobius details PF02321: OEP" amino acids 121 to 270 (150 residues), 63.7 bits, see alignment E=1.1e-21 amino acids 293 to 478 (186 residues), 91.1 bits, see alignment E=4.1e-30

Best Hits

KEGG orthology group: None (inferred from 48% identity to mtt:Ftrac_3119)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0G5G2 at UniProt or InterPro

Protein Sequence (498 amino acids)

>Echvi_4615 Outer membrane protein (Echinicola vietnamensis KMM 6221, DSM 17526)
MNKHITFFVFIFCLMFSVPCHVNGQERIKYTLQDIIARAKSVSPAALRAETQRQNSYWQY
RFYKSNYNPQLRLNGELPSYTQEVKAVEQNDGSYLNVPLKQSLVDVGLGLQQEIALTGGS
ISVNTSASRFDNYLTDSPEGQTQWRGVPVNIQLYQPIFAFNQLKWDKKIEPLRYEESKKS
YVEEMEQISQRATQLFFNYLVAQVGYDIAMQNKTNTEAIYKIEKGRYNIGTTTEDQLLQV
ELQVLQADQDLTSAQLSLESSALALRSYIGLNENTQFDLVLPDEIPDFVVDVDKAISLAF
ENSSDAVNFKIQRLEADAEVARAKGQRFNLDLNARYGYNNAAMSWGGIYENPDQQAVVSL
GVSVPVLDWGRNKARMGRAKANKELVNYTIDQEVINFEQEVFTRVKNFQQLRSRIMISEK
ADEVAAKRYEISRQRYLSGKVDITNLNIAQQEKDSNRRSYIQSLQEYWQAYYELRQLTLY
DFQNEKLLYNQEIELKAD