Protein Info for Echvi_4206 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: Uncharacterized protein conserved in bacteria

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1009 PF22548: AEP-TOTE" amino acids 12 to 240 (229 residues), 283.4 bits, see alignment E=3.6e-88 PF04851: ResIII" amino acids 363 to 510 (148 residues), 99.2 bits, see alignment E=6e-32 PF00270: DEAD" amino acids 367 to 510 (144 residues), 49.6 bits, see alignment E=9.5e-17 PF18766: SWI2_SNF2" amino acids 372 to 513 (142 residues), 27.1 bits, see alignment E=7.8e-10 PF00271: Helicase_C" amino acids 579 to 682 (104 residues), 31.3 bits, see alignment E=5.3e-11

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0G506 at UniProt or InterPro

Protein Sequence (1009 amino acids)

>Echvi_4206 Uncharacterized protein conserved in bacteria (Echinicola vietnamensis KMM 6221, DSM 17526)
MGNFVITYSESDKLEIFNGLFKGRSDVFAVRWEKGAKAGYMPAYHYDPYMYRRHKRNGGT
FKTYKDKSYIPLKGIEVLKHLNGEHHIGIYPLLQDNTSWFIAADFDGKNWEGECKKVMGL
CKSKNIPSYLERSRSGNGGHIWIFFASPYPARKSRKLLVHLLKESQSISEFDKFSSFDRL
FPNQDYLSGKGLGNLIALPLNQAVLEKGNGGFLNDNMEPYQDQWTFLKSVKKISVDRLDA
LYDQLILVAHGSSPSDFNTSKKLLIKLSNNIRLNKSAITIELTDFLKEELNFSNSAYFVK
KKVGRSTHGTPSHFRLIDETENEVVIPRGIMGRLARFCTAHNIPFEFKDERKLQQTISFN
TTFRLREHQEKTVCAAEKKQFGIIVAPPGTGKTIIGLQIIANKKQPTLIIVHRKQLMAQW
LERIQSFMGLRKAEIGRIGQGRAKIGKKVTVAMFQSLAKFLDKPESSEYYDAFGTVIIDE
CHHISAESFRNSLSKLSTFYLYGLTATPFRKGNDGRLIFIYLGDVIASIDPKETKNYRPA
TVKVRKTALQVPFNPKTDSFETLSKILVNDSARNQLIIKDVIKEVNEGGSVVIITERREH
IATLNHYLKGVFEVITLSGEDNERSRKGKWGQISRGDFQVLITTGQLMGEGVDLNNISRL
FLVYPFSFKGKLIQYIGRVQRSELAPVIYDYRDYLVDYLDRLFLKRNTYYRKLKKEADLF
MDLSESGEMSAVTIDKTVKIALDKLDFRYGSIAFNYPVQELNTEIEFELENEYVRPEIEV
LKPYFSKSLKMKYANVEIFAEFENGMLVTQRAESEDLGKINQDTIESVRFQFAIDEIKND
PNHQNDNRATSDLEGLRKSNQFPGSHFTEEQLINNLIGDEKYRHFRQLRYLASKHEGSLL
KIRFILKPFSFVFLLKGKKFHHIILETLDTEEATYIWHTEIMVNGGGISQSLLGKRLNEV
ESDLQNIKDKGRQAFIESSPESFSRLNHDYSDPRKGYILWKGQLEERLV