Protein Info for Echvi_3891 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: Uncharacterized protein conserved in bacteria

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 518 PF07661: MORN_2" amino acids 59 to 80 (22 residues), 13 bits, see alignment (E = 5.2e-06) amino acids 141 to 161 (21 residues), 23.3 bits, see alignment (E = 2.4e-09) amino acids 165 to 185 (21 residues), 13.1 bits, see alignment (E = 4.9e-06) amino acids 311 to 332 (22 residues), 22.6 bits, see alignment (E = 4e-09) amino acids 360 to 378 (19 residues), 12.5 bits, see alignment (E = 7.8e-06) amino acids 454 to 474 (21 residues), 15.7 bits, see alignment (E = 6.8e-07) amino acids 478 to 499 (22 residues), 13.5 bits, see alignment (E = 3.7e-06)

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0G474 at UniProt or InterPro

Protein Sequence (518 amino acids)

>Echvi_3891 Uncharacterized protein conserved in bacteria (Echinicola vietnamensis KMM 6221, DSM 17526)
MASTTFSYSQKKAVQIYNADSSVVASGVVVDGKMEGLWQLNSPKDERLLEEGYLKAGKKD
GTWTTYYANGTKHIVAEYRNGNLTGPFKEYDKEGYLLVDATYKDSVAVGEYKEYYGASVA
VYGYNPSRRRKREGQFKAGMLDGEWLSYYESGQLAIKSTYKEGELHGPYLEYSREGQLVI
EVNYVEGEPDGNFTRYSIDNVVEQTGEYTNGKKTGTWTTYFPGSKTVASEEQYDENGHKT
GTWKYYYENRRLARVERYENDIPVGTWEEYFPNKNLAKRKVYELGMPVGEYQENHEDGEP
SVRGQYSGGVKTGLWKSYYTDGQLYSIGEYKNGVKSGLWKYFNKIGILIAEGEYELGSEH
GQWFYYYDGGQLKSVGSYFYGFEEGTWGLFYDNKNLTQEEYWSNGRLMNVSEYHTYNGKS
TLDKGTLKDGEGTRFTYYVNGTKESEGTYSFGKQTGKWTYYHDNGKIASSGNMEDGKKEG
RWNYYTRSGKLAEIITFKDDEIVPDKLPEPDLPFQTFD