Protein Info for Echvi_3858 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: Methyltransferase domain.

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 236 PF13489: Methyltransf_23" amino acids 29 to 152 (124 residues), 36.1 bits, see alignment E=2.1e-12 PF07021: MetW" amino acids 34 to 126 (93 residues), 21.2 bits, see alignment E=7.9e-08 PF13847: Methyltransf_31" amino acids 40 to 121 (82 residues), 46.9 bits, see alignment E=1e-15 PF13649: Methyltransf_25" amino acids 45 to 135 (91 residues), 49.3 bits, see alignment E=2.6e-16 PF08241: Methyltransf_11" amino acids 48 to 136 (89 residues), 33.3 bits, see alignment E=2.5e-11 PF08242: Methyltransf_12" amino acids 48 to 135 (88 residues), 33 bits, see alignment E=3.3e-11

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0G5G1 at UniProt or InterPro

Protein Sequence (236 amino acids)

>Echvi_3858 Methyltransferase domain. (Echinicola vietnamensis KMM 6221, DSM 17526)
MEEKDKYISFYDQFSTDSRKQEISALNVSILDKLVAEGLKSNHKVIEGGCGLGELSHLLA
NKVKNGKVLGVDINEDTVQRASELWKKQKNLSFVKAEMKAFENRGETYDFFVLTDILQQI
TTDKHLRLFEAVRRHSHEDTTIFIHLPTPRFSEWRAYNDPESLQFIEPSVNIAGLVESLT
VNDFYLEKAVSYNVFYEENDFQYFIFKPLTRIAAPTPKKKWANLKEKLPNNLLGLL