Protein Info for Echvi_3706 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: Uncharacterized protein conserved in bacteria

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 434 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details PF07661: MORN_2" amino acids 47 to 67 (21 residues), 17 bits, see alignment (E = 2.6e-07) amino acids 144 to 163 (20 residues), 15.2 bits, see alignment (E = 1e-06) amino acids 167 to 187 (21 residues), 21.5 bits, see alignment (E = 8.9e-09) amino acids 191 to 211 (21 residues), 22 bits, see alignment (E = 6.1e-09) amino acids 219 to 236 (18 residues), 15.2 bits, see alignment (E = 9.8e-07) amino acids 240 to 260 (21 residues), 14 bits, see alignment (E = 2.4e-06) amino acids 292 to 305 (14 residues), 10.6 bits, see alignment (E = 3e-05) amino acids 361 to 379 (19 residues), 19.3 bits, see alignment (E = 4.6e-08)

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0G3M6 at UniProt or InterPro

Protein Sequence (434 amino acids)

>Echvi_3706 Uncharacterized protein conserved in bacteria (Echinicola vietnamensis KMM 6221, DSM 17526)
MFLKYTILFFLSLLCFYGNAQDTVRTYYDEEQSKLMEIYFSENDQIEGTYRRYYEDGSLQ
LEGMFVNGKREGVFVHYYPEQGDTLKTVAYENNLREGPALSYDQSGNLIQKAAFQEDMME
GTLETYFPEGALKMTGPFLHNKPQGKHTEYYSSGTVRSEANYEAGVLEGSFKSFYENGQL
QSHEHYEAGQLDGQVTAYYPNGQLKEQAYYDKGVQDDVFTAYFEDGQIAKKGNYKNGRPD
GVFKTFYPSGTTKALIEYKKGTPVGNQILYYPSAKKSEVIAYDRDGIKQQHIFYHENGQI
QKKVQLVQGVPQGQVIAYDEDGRKQEVIPYQYGQWDGTYRRFDQAGNLILEQEFRKGKPY
GEEKSYHPNGQLKTLTTYDAGWKHGPYQSVNPQGTVLVEGSYWYNKKSNTWKYYDEEGTL
IKTEKYDKKGKLVE