Protein Info for Echvi_3613 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: Imidazolonepropionase and related amidohydrolases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 458 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details PF01979: Amidohydro_1" amino acids 314 to 400 (87 residues), 55 bits, see alignment E=8.6e-19 PF07969: Amidohydro_3" amino acids 335 to 402 (68 residues), 36.5 bits, see alignment E=4.4e-13

Best Hits

KEGG orthology group: None (inferred from 65% identity to hhy:Halhy_2376)

Predicted SEED Role

"Secreted enzyme, contains two amidohydrolase related domains"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0G0U8 at UniProt or InterPro

Protein Sequence (458 amino acids)

>Echvi_3613 Imidazolonepropionase and related amidohydrolases (Echinicola vietnamensis KMM 6221, DSM 17526)
MRKLTYIICSLCLIATQHLGAQTPKGNVLIKNATVLTVTQGTLENTDVWVQDGIIKKVGQ
DLSASKDAETIDATGKFLMPGIIDAHSHLALDVVNEATAPITAEVAIADVINPFDVGIYR
ALAGGTTIAHGLHGSANAIGGQSITMKYRYGTRNPSDLIMKEAPRTIKFALGENPTRVHG
QGKNIQPRTRMGVEAIIRNGFNEALQYEKKWEAYNQAKGQKNSKAVPPAYNLRLQTLADI
LNGEIIIHCHSYRADEIYMLINVCRDFGVDKLVFTHVNEGFKVAPELAKYTMGASVFSDW
WAYKFEVYYSTAYNAAILTENGVITSINSDSDELIRHLYHEAAKTQRYGGLSDEQALALI
TINPAKQLGIDEYVGSIEEGKQGDLVIFDHHPLSVYAVPQMTFVDGIKQFDINEDKDDQR
LKVSPTERVEPVYLQVEEESCMHGVELFTEGTVLHHSY