Protein Info for Echvi_3404 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: Predicted acyltransferases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 688 transmembrane" amino acids 12 to 30 (19 residues), see Phobius details amino acids 36 to 54 (19 residues), see Phobius details amino acids 75 to 95 (21 residues), see Phobius details amino acids 101 to 120 (20 residues), see Phobius details amino acids 139 to 156 (18 residues), see Phobius details amino acids 165 to 186 (22 residues), see Phobius details amino acids 206 to 225 (20 residues), see Phobius details amino acids 237 to 253 (17 residues), see Phobius details amino acids 259 to 278 (20 residues), see Phobius details amino acids 294 to 314 (21 residues), see Phobius details amino acids 326 to 347 (22 residues), see Phobius details amino acids 358 to 379 (22 residues), see Phobius details PF01757: Acyl_transf_3" amino acids 8 to 344 (337 residues), 122.1 bits, see alignment E=2.7e-39 PF19040: SGNH" amino acids 438 to 658 (221 residues), 53.1 bits, see alignment E=3.8e-18

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0G0C4 at UniProt or InterPro

Protein Sequence (688 amino acids)

>Echvi_3404 Predicted acyltransferases (Echinicola vietnamensis KMM 6221, DSM 17526)
MSTIKYRPEIDGLRSVAVVPVILFHLGLGWITGGFYGVDVFFVISGYLITSIIVKNLESG
KFTFGDFWLRRVKRIMPALIGVILFCFMIFPFLIYEGDIHYMVLDGFAALFSVANFNAYL
NLGDYWSGRAETSFFLHAWSLSVEEQFYLVYPLILFFLHKWGQSLLKWVIAIVVLSFLLY
CFGVFFELKAFPFNALSSNSVTFYMIPSRAWELGIGCITALIVRAGYRDKSSAKTKASFS
LLGLLLIICSYLIPTDGDVSLIAIMPTVGTGLFIFFANDSVFAGKILSSKPLVFIGKISY
SLYLWHWPFCVLFHKYLSIKYSISDSIATIFILILTTVFSILSYYLIEEKTRYYKNTVKL
VGSLAVAVLCFGGLYMQVLFKEIEAPFNYVDHYFHYYSINPELFHKKSNSTEVDPKDMKI
NHFLTSRKSPEFDKGGLVLGNPEIEHPEIVVIGDSHGCGWAKVLNEISDSLNTKTTFYVG
DGMFMHFPIKDGKLPDEMPPINSFTEDQARSYGENVLKSIANAKLVIISNRLTGSYPRTM
EQMSYIDDFINYSTSMGAKVMLINQPPLLAIPPKRQLTPLLIYFGYKPNDQNQYIGEFMS
SSIDSYNERLEEMAKKYDKASVYNAYDIFKHPQKGVWVIDKKDVLYRDINHLSYQGTLKA
KDGLYQHISHLMNLSPLVADKAVTKLNN