Protein Info for Echvi_3327 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: Predicted deacylase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 341 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details PF04952: AstE_AspA" amino acids 60 to 340 (281 residues), 131.9 bits, see alignment E=1.5e-42

Best Hits

KEGG orthology group: K06987, (no description) (inferred from 43% identity to zpr:ZPR_1584)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0G407 at UniProt or InterPro

Protein Sequence (341 amino acids)

>Echvi_3327 Predicted deacylase (Echinicola vietnamensis KMM 6221, DSM 17526)
MRNGIKYAILLFAIMVGFICHPVSGQDLTSIQQGTRKDTLVRIDNNDAVALSIIKGKFDG
PVFTIVAGIHGFEYPPIMAVQELLKKVDPDKLHGTLLVLPMANEAAFYERSVFVNPTDDK
NLNRAFPGNATGSITERIAHWISQKVIPISDVFLDIHGGDASEDLLPFVCYYHRADKPDQ
VAQAHRLTEAANFEYNVIYPYHLSPDDMSEYAFKEAVQQGKTALSIEAGKLGNVQPEMVA
MITSGVLNMLNKMDMYPYENDKRVNQKWLREQVYIKCPATGIFYSDFRSGDKIKKGQVLG
YITNVFGKKLDEVRAPSSGIVLYKIGTPPANKGETLFCIGK