Protein Info for Echvi_3067 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: Prolyl oligopeptidase family.

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 941 signal peptide" amino acids 1 to 20 (20 residues), see Phobius details PF00326: Peptidase_S9" amino acids 735 to 915 (181 residues), 89.5 bits, see alignment E=1.1e-29

Best Hits

Predicted SEED Role

"probable acylaminoacyl-peptidase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0G381 at UniProt or InterPro

Protein Sequence (941 amino acids)

>Echvi_3067 Prolyl oligopeptidase family. (Echinicola vietnamensis KMM 6221, DSM 17526)
MNRLRVVLLLVLVSLNAFGQQKRPLKHEDYDGWESVSSTSLSKDGHWVGFEINPQDGDGR
VEVKPHDGQGNSFSIERGDHYTFSHDSHWVVGKILPQKDTVRMLKLAEKKAKDMPKDSLF
ILSLEEGGLEKLSRIKSFKVPEKEGNWLAIHFEKEDKDASKDKSAKDSTETDSTHKKKHP
KTDGTLLTVRNFDGSVSYEIQRVAQYGFSEKGDYLYFVQAEEDTLDNAAIGLLALKNGER
TLLDSGMTKYSDAAFSKDLKHFAYLASGDSAKAEEPYYQLFLHNIGKDGSEAIVTKDTEG
LLAEGKVAKSGNLKFSENGSRLFFGVNEDYKTYAYEDDTTILDEDRVSLDIWSWKDDEIQ
PMQLENKDREANKSFLAVYDLKDKSVVQLGDREVDNVNLDKDAKFDLVIATDDRPYRINY
SWDIQIGRDIYLIDVETGQKKMIAKNAKGYPSLSPAAKYVHWYSYPDSAWLAYDIAGQKT
VNLTNTIEDDFYDQLHDSPSMPRSYGSAGWTKDDQAFIVYSRYDIWKIDPSGKKDPVNIT
GGTGKAQKTSFRREVLDREEEFIDPKAPLILSAFNEQNKKSGYFKGDINGDETPEELIFT
DHRYYGLEKAKAADEVIVRRSTFQEYPDVYATDLDMGALTQLSHANPQQKEINWGTVELT
EFMTLKGDSLQGMIYKPEDFDPNKKYPLMVYFYERRSDSFHNYISPAPSASIINISYFVS
NGYVVFVPDIKYDIGHPGKSAYDCIVPGVMSVVEKGYVDTDNMAIQGQSWGGYQVAYLIT
QTDMFKAAGAGAPVANMTSAYGGIRWGSGMSRMFQYEQTQSRIGGTLWEKPMEYIENSPL
FFADQVNTPVLIMHNDKDGAVPWYQGIEFFMSLKRNRTPAWLLVYNGEDHNLRKRKNRKD
LSIRLSQFFDHYLKGAPAPLWMTEGLPAVEKGRTLKYELSE