Protein Info for Echvi_3043 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: Peroxiredoxin

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 372 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details PF14289: DUF4369" amino acids 33 to 120 (88 residues), 40.2 bits, see alignment E=1.3e-13 PF00578: AhpC-TSA" amino acids 236 to 354 (119 residues), 95.7 bits, see alignment E=6e-31 PF08534: Redoxin" amino acids 237 to 358 (122 residues), 73.7 bits, see alignment E=4.2e-24 PF13098: Thioredoxin_2" amino acids 253 to 369 (117 residues), 28.5 bits, see alignment E=4.9e-10 PF00085: Thioredoxin" amino acids 260 to 307 (48 residues), 28.1 bits, see alignment 5.1e-10 PF13905: Thioredoxin_8" amino acids 260 to 353 (94 residues), 53.4 bits, see alignment E=8.7e-18

Best Hits

KEGG orthology group: None (inferred from 39% identity to mtt:Ftrac_2913)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0G2Q4 at UniProt or InterPro

Protein Sequence (372 amino acids)

>Echvi_3043 Peroxiredoxin (Echinicola vietnamensis KMM 6221, DSM 17526)
MTKFNYMFVLAALLMVAACSNEVKEEAFDGEVIISGKLANTPEGELILSKYTDNSVEPID
TLKVKDNGKFEYSLSLEGPAFYELDLFGVKQVRLALYNEDVTVDYDFDNEESLAVSGSFD
TEQVGKVDQLAEDYQAQINQLNSEYYEALSAKDEAAVKSIQEKALSLESDHSEKVKSTID
GMNGSFAALAAVGMLNPRNDFSYIDSLVTELDTKYPETKMIVALKQQLDEMRALSIGQPA
PEIALPNPEGEEIKLSDFKGKYVLIDFWAAWCKPCREENPNVVRLYNEYHEKGFEVFGVS
LDRSKDAWTKAIEEDNLTWTHVSDLKYFNSEAAATYKINAIPATYMIDPEGKIIAKDLRG
PALENKLKEIFE