Protein Info for Echvi_2980 in Echinicola vietnamensis KMM 6221, DSM 17526

Annotation: probable methyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 320 PF10017: Methyltransf_33" amino acids 11 to 318 (308 residues), 350.3 bits, see alignment E=4.1e-109 TIGR03438: dimethylhistidine N-methyltransferase" amino acids 11 to 313 (303 residues), 309.3 bits, see alignment E=1.3e-96

Best Hits

KEGG orthology group: None (inferred from 46% identity to mtt:Ftrac_3143)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See L0G1N5 at UniProt or InterPro

Protein Sequence (320 amino acids)

>Echvi_2980 probable methyltransferase (Echinicola vietnamensis KMM 6221, DSM 17526)
MESTIKTDTEFAKDVLEGLSAKPKHLSSKYFYDEKGDKLFQKIMGLPEYYLTKKEFSILD
SHKVEILADLLASPSFNLVELGAGDGLKTKILIRYLQNEKANFTYYPIDISGSVLRELKT
DLQQSFPALDVQPIKGTYKRALEERKWENQHPSLLLFLGGNIGNFTYQEAFSMLNRIARS
LKSGDYLLVGFDLKKDPATILKAYNDAEGVTRDFNLNILSRINKELGGNFDMAKFKHWPT
YDPVTGECRSYLVSSEKQKVEVKDLKRTFYFENAEAIHTEISKKYSHEELEELAVKSGFR
VIRDFDDPDHYFTDALWQKQ